Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01603 | Not Available | - | 1850269 - 1850832 | 21227.1 |
| two-component system, narl family, vancomycin resistance associated response regulator vrar | SAMN02910353_01604 | Not Available | - | 1851095 - 1851727 | 23530.8 |
| hypothetical protein | SAMN02910353_01605 | Not Available | - | 1851699 - 1852955 | 47324.7 |
| hypothetical protein | SAMN02910353_01606 | Not Available | - | 1852948 - 1854558 | 60212.0 |
| hypothetical protein | SAMN02910353_01607 | Not Available | + | 1854796 - 1854990 | 7086.54 |
| alpha/beta hydrolase fold | SAMN02910353_01608 | Not Available | - | 1855294 - 1856058 | 29019.3 |
| hypothetical protein | SAMN02910353_01609 | Not Available | - | 1856166 - 1856729 | 21221.2 |
| smi1-knr4 cell-wall | SAMN02910353_01610 | Not Available | + | 1857006 - 1857410 | 15084.0 |
| hypothetical protein | SAMN02910353_01611 | Not Available | + | 1857421 - 1858461 | 39864.9 |
| hypothetical protein | SAMN02910353_01612 | Not Available | + | 1858537 - 1859025 | 19321.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.