Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted phospholipase, patatin/cpla2 family | SAMN02910353_01593 | Not Available | - | 1834533 - 1835432 | 33138.4 |
| neurotransmitter:na+ symporter, nss family | SAMN02910353_01594 | Not Available | - | 1835474 - 1836874 | 50768.9 |
| dna-binding transcriptional regulator, laci/purr family | SAMN02910353_01595 | Not Available | + | 1837171 - 1839348 | 82704.5 |
| endoglucanase | SAMN02910353_01596 | Not Available | + | 1839467 - 1840852 | 51902.9 |
| alanine or glycine:cation symporter, agcs family | SAMN02910353_01597 | Not Available | - | 1840948 - 1842369 | 50276.2 |
| hypothetical protein | SAMN02910353_01598 | Not Available | + | 1842640 - 1842825 | 6039.34 |
| hypothetical protein | SAMN02910353_01599 | Not Available | - | 1842899 - 1843708 | 27182.4 |
| leucine rich repeat-containing protein | SAMN02910353_01600 | Not Available | - | 1844087 - 1849403 | 193495.0 |
| hypothetical protein | SAMN02910353_01601 | Not Available | - | 1849421 - 1849846 | 15915.6 |
| hypothetical protein | SAMN02910353_01602 | Not Available | - | 1849883 - 1850257 | 14115.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.