Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdsl-like lipase/acylhydrolase family protein | SAMN02910353_01583 | Not Available | + | 1813507 - 1814553 | 38734.9 |
| hypothetical protein | SAMN02910353_01584 | Not Available | - | 1814668 - 1816056 | 53314.1 |
| small gtp-binding protein domain-containing protein | SAMN02910353_01585 | Not Available | - | 1816161 - 1818716 | 95518.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN02910353_01586 | Not Available | - | 1819221 - 1819739 | 19505.5 |
| hypothetical protein | SAMN02910353_01587 | Not Available | - | 1819861 - 1821786 | 72903.9 |
| surface protein | SAMN02910353_01588 | Not Available | - | 1822334 - 1824745 | 87480.2 |
| atp-binding cassette, subfamily f, uup | SAMN02910353_01589 | Not Available | - | 1824990 - 1826792 | 67956.0 |
| hypothetical protein | SAMN02910353_01590 | Not Available | - | 1826912 - 1829089 | 80508.7 |
| enterochelin esterase and related enzymes | SAMN02910353_01591 | Not Available | + | 1829398 - 1831917 | 92545.7 |
| dna-binding transcriptional regulator, laci/purr family | SAMN02910353_01592 | Not Available | + | 1832045 - 1834276 | 82972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.