Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01563 | Not Available | + | 1783502 - 1783924 | 15662.7 |
| flavodoxin | SAMN02910353_01564 | Not Available | + | 1784099 - 1784857 | 27486.5 |
| protein of unknown function | SAMN02910353_01565 | Not Available | + | 1785343 - 1786029 | 25770.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN02910353_01566 | Not Available | + | 1786237 - 1786770 | 20680.4 |
| hypothetical protein | SAMN02910353_01567 | Not Available | + | 1786809 - 1787123 | 11987.0 |
| biotin transport system substrate-specific component | SAMN02910353_01568 | Not Available | - | 1787166 - 1787756 | 21231.9 |
| cu2+-exporting atpase | SAMN02910353_01569 | Not Available | - | 1787846 - 1790362 | 87592.4 |
| cation-transporting atpase e | SAMN02910353_01570 | Not Available | + | 1790710 - 1793094 | 86459.0 |
| carbohydrate binding domain-containing protein | SAMN02910353_01571 | Not Available | - | 1793208 - 1795436 | 80919.8 |
| beta-glucanase, gh16 family | SAMN02910353_01572 | Not Available | - | 1795708 - 1797108 | 53426.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.