Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01553 | Not Available | + | 1770421 - 1771083 | 24847.6 |
| hypothetical protein | SAMN02910353_01554 | Not Available | + | 1771219 - 1771446 | 8999.09 |
| sec-c motif-containing protein | SAMN02910353_01555 | Not Available | + | 1771591 - 1773468 | 72054.7 |
| atpase family associated with various cellular activities (aaa) | SAMN02910353_01556 | Not Available | - | 1773829 - 1775334 | 57200.0 |
| putative metallopeptidase domain-containing protein | SAMN02910353_01557 | Not Available | - | 1775334 - 1776716 | 53630.9 |
| leucine rich repeat-containing protein | SAMN02910353_01558 | Not Available | - | 1776835 - 1779654 | 103082.0 |
| leucine rich repeat-containing protein | SAMN02910353_01559 | Not Available | - | 1779818 - 1780723 | 33977.9 |
| flavodoxin | SAMN02910353_01560 | Not Available | + | 1781469 - 1781975 | 18679.2 |
| aldo/keto reductase | SAMN02910353_01561 | Not Available | + | 1781988 - 1782839 | 32216.4 |
| dna-binding transcriptional regulator, acrr family | SAMN02910353_01562 | Not Available | + | 1782915 - 1783496 | 22579.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.