Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| snf2 family n-terminal domain-containing protein | SAMN02910353_01543 | Not Available | - | 1760321 - 1761658 | 50587.0 |
| phage/plasmid primase, p4 family, c-terminal domain-containing protein | SAMN02910353_01544 | Not Available | - | 1762088 - 1764310 | 83133.5 |
| hypothetical protein | SAMN02910353_01545 | Not Available | - | 1764307 - 1764735 | 16730.9 |
| hypothetical protein | SAMN02910353_01546 | Not Available | - | 1764725 - 1764889 | 6231.59 |
| dna polymerase | SAMN02910353_01547 | Not Available | - | 1764894 - 1766870 | 74128.7 |
| protein of unknown function | SAMN02910353_01548 | Not Available | - | 1766938 - 1767501 | 20174.6 |
| protein of unknown function | SAMN02910353_01549 | Not Available | - | 1767503 - 1768618 | 41286.8 |
| hypothetical protein | SAMN02910353_01550 | Not Available | - | 1768615 - 1768959 | 12566.8 |
| hypothetical protein | SAMN02910353_01551 | Not Available | - | 1768962 - 1769150 | 7048.92 |
| hypothetical protein | SAMN02910353_01552 | Not Available | - | 1769192 - 1769626 | 16485.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.