Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN02910353_01474 | Not Available | - | 1694010 - 1695941 | 70702.1 |
| abc-2 family transporter protein | SAMN02910353_01475 | Not Available | - | 1695946 - 1696695 | 27242.6 |
| abc-2 family transporter protein | SAMN02910353_01476 | Not Available | - | 1696707 - 1697459 | 27553.2 |
| abc-2 type transport system atp-binding protein | SAMN02910353_01477 | Not Available | - | 1697428 - 1698312 | 32893.5 |
| gntr family transcriptional regulator | SAMN02910353_01478 | Not Available | - | 1698314 - 1698685 | 13998.9 |
| cysteine synthase a | SAMN02910353_01479 | Not Available | - | 1698994 - 1699923 | 33515.4 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN02910353_01480 | Not Available | - | 1700328 - 1701080 | 26874.6 |
| uncharacterized membrane protein | SAMN02910353_01481 | Not Available | - | 1701091 - 1701612 | 17870.2 |
| o-acetylhomoserine (thiol)-lyase | SAMN02910353_01482 | Not Available | - | 1702049 - 1703329 | 46030.6 |
| atp-dependent rna helicase dead | SAMN02910353_01483 | Not Available | + | 1703586 - 1705313 | 64082.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.