Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase-1 | SAMN02910353_01464 | Not Available | - | 1683170 - 1685251 | 77202.5 |
| dna processing protein | SAMN02910353_01465 | Not Available | - | 1685270 - 1686505 | 44422.9 |
| rna methyltransferase, trmh family | SAMN02910353_01466 | Not Available | - | 1686529 - 1687326 | 29134.2 |
| large subunit ribosomal protein l20 | SAMN02910353_01467 | Not Available | - | 1687437 - 1687790 | 13121.5 |
| large subunit ribosomal protein l35 | SAMN02910353_01468 | Not Available | - | 1687850 - 1688053 | 7509.45 |
| translation initiation factor if-3 | SAMN02910353_01469 | Not Available | - | 1688090 - 1688614 | 19716.0 |
| stage ii sporulation protein r | SAMN02910353_01470 | Not Available | - | 1688804 - 1689451 | 23883.4 |
| hypothetical protein | SAMN02910353_01471 | Not Available | - | 1689610 - 1689840 | 8529.28 |
| leucine rich repeat-containing protein | SAMN02910353_01472 | Not Available | + | 1690114 - 1691028 | 32755.1 |
| glycosyl hydrolase family 9 | SAMN02910353_01473 | Not Available | + | 1691155 - 1693800 | 97695.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.