Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | SAMN02910353_01454 | Not Available | - | 1671962 - 1672558 | 23096.1 |
| multimeric flavodoxin wrba | SAMN02910353_01455 | Not Available | - | 1672565 - 1673260 | 26126.9 |
| rna-binding protein | SAMN02910353_01456 | Not Available | - | 1673260 - 1673562 | 10967.3 |
| xtp/ditp diphosphohydrolase | SAMN02910353_01457 | Not Available | - | 1673562 - 1674146 | 20786.5 |
| signal recognition particle-docking protein ftsy | SAMN02910353_01458 | Not Available | - | 1674136 - 1675584 | 53546.2 |
| condensin subunit smc | SAMN02910353_01459 | Not Available | - | 1675607 - 1679179 | 133971.0 |
| radical sam superfamily protein | SAMN02910353_01460 | Not Available | - | 1679184 - 1680179 | 36575.1 |
| ribonuclease-3 | SAMN02910353_01461 | Not Available | - | 1680166 - 1680858 | 25714.8 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN02910353_01462 | Not Available | - | 1680851 - 1681870 | 36102.0 |
| methylenetetrahydrofolate--trna-(uracil-5-)- methyltransferase | SAMN02910353_01463 | Not Available | - | 1681848 - 1683173 | 48638.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.