Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | SAMN02910353_01444 | Not Available | - | 1663297 - 1663854 | 20619.5 |
| xaa-pro aminopeptidase | SAMN02910353_01445 | Not Available | - | 1663942 - 1665009 | 39274.1 |
| 3-dehydroquinate dehydratase | SAMN02910353_01446 | Not Available | - | 1665019 - 1665450 | 15655.9 |
| hypothetical protein | SAMN02910353_01447 | Not Available | - | 1665453 - 1666001 | 20514.4 |
| small subunit ribosomal protein s21 | SAMN02910353_01448 | Not Available | - | 1666153 - 1666326 | 6675.19 |
| leucyl-trna synthetase | SAMN02910353_01449 | Not Available | - | 1666513 - 1668945 | 92503.9 |
| hypothetical protein | SAMN02910353_01450 | Not Available | - | 1668973 - 1669356 | 13963.5 |
| ribosome-associated protein | SAMN02910353_01451 | Not Available | - | 1669343 - 1669720 | 14272.8 |
| transcriptional attenuator, lytr family | SAMN02910353_01452 | Not Available | - | 1669724 - 1671310 | 60290.7 |
| putative hd superfamily hydrolase of nad metabolism | SAMN02910353_01453 | Not Available | - | 1671353 - 1671952 | 22896.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.