Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| neurofilament heavy polypeptide | SAMN02910353_01424 | Not Available | + | 1640482 - 1641258 | 27477.7 |
| phosphoglycolate phosphatase | SAMN02910353_01425 | Not Available | - | 1641433 - 1642068 | 23951.4 |
| glycerol-1-phosphate dehydrogenase | SAMN02910353_01426 | Not Available | - | 1642065 - 1643129 | 39027.9 |
| secreted protein containing c-terminal beta-propeller domain | SAMN02910353_01427 | Not Available | - | 1643353 - 1645596 | 82726.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_01428 | Not Available | - | 1645633 - 1646139 | 19081.7 |
| glucokinase | SAMN02910353_01429 | Not Available | - | 1646353 - 1647318 | 33625.3 |
| mannose-6-phosphate isomerase | SAMN02910353_01430 | Not Available | - | 1647315 - 1648292 | 36090.8 |
| lysozyme | SAMN02910353_01431 | Not Available | - | 1648674 - 1649351 | 25743.7 |
| hypothetical protein | SAMN02910353_01432 | Not Available | - | 1649397 - 1651583 | 78381.6 |
| hypothetical protein | SAMN02910353_01433 | Not Available | - | 1651736 - 1652692 | 35806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.