Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch phosphorylase | SAMN02910353_01403 | Not Available | - | 1621336 - 1623678 | 88821.5 |
| hypothetical protein | SAMN02910353_01404 | Not Available | - | 1623728 - 1624606 | 33032.3 |
| 4-alpha-glucanotransferase | SAMN02910353_01405 | Not Available | - | 1624603 - 1626075 | 56821.3 |
| putative abc-transporter type iv | SAMN02910353_01406 | Not Available | + | 1626146 - 1626523 | 14149.8 |
| triacylglycerol lipase | SAMN02910353_01407 | Not Available | - | 1626535 - 1627881 | 51030.1 |
| hypothetical protein | SAMN02910353_01408 | Not Available | - | 1627906 - 1628340 | 16817.8 |
| hypothetical protein | SAMN02910353_01409 | Not Available | - | 1628361 - 1628510 | 5647.84 |
| hypothetical protein | SAMN02910353_01410 | Not Available | + | 1628642 - 1629067 | 15002.1 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN02910353_01411 | Not Available | - | 1629105 - 1630091 | 36618.0 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN02910353_01412 | Not Available | - | 1630188 - 1631471 | 46322.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.