Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yhfc | SAMN02910353_01363 | Not Available | - | 1566692 - 1567519 | 30310.1 |
| carbohydrate binding domain-containing protein | SAMN02910353_01364 | Not Available | - | 1567668 - 1570865 | 115248.0 |
| cellulose binding domain-containing protein | SAMN02910353_01365 | Not Available | - | 1571192 - 1573687 | 90816.9 |
| hypothetical protein | SAMN02910353_01366 | Not Available | + | 1574009 - 1574326 | 11223.4 |
| hypothetical protein | SAMN02910353_01367 | Not Available | + | 1574360 - 1574674 | 11220.5 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN02910353_01368 | Not Available | + | 1574675 - 1576072 | 53161.6 |
| hypothetical protein | SAMN02910353_01369 | Not Available | - | 1576117 - 1577268 | 42400.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN02910353_01370 | Not Available | - | 1577334 - 1579328 | 73194.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN02910353_01371 | Not Available | - | 1579321 - 1579950 | 23502.6 |
| ribosomal protein s18 acetylase rimi | SAMN02910353_01372 | Not Available | - | 1579955 - 1580401 | 16823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.