Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01353 | Not Available | + | 1562547 - 1562747 | 7196.4 |
| hypothetical protein | SAMN02910353_01354 | Not Available | + | 1562790 - 1563107 | 11617.8 |
| hypothetical protein | SAMN02910353_01355 | Not Available | + | 1563150 - 1563458 | 11021.2 |
| hypothetical protein | SAMN02910353_01356 | Not Available | + | 1563511 - 1563810 | 10143.3 |
| hypothetical protein | SAMN02910353_01357 | Not Available | + | 1563823 - 1564080 | 9269.78 |
| large subunit ribosomal protein l33 | SAMN02910353_01358 | Not Available | + | 1564319 - 1564468 | 5979.48 |
| preprotein translocase subunit sece | SAMN02910353_01359 | Not Available | + | 1564484 - 1564744 | 9678.96 |
| transcription antitermination protein nusg | SAMN02910353_01360 | Not Available | + | 1564766 - 1565293 | 19658.5 |
| lsu ribosomal protein l11p | SAMN02910353_01361 | Not Available | + | 1565386 - 1565811 | 14910.6 |
| large subunit ribosomal protein l1 | SAMN02910353_01362 | Not Available | + | 1565929 - 1566624 | 24551.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.