Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage v sporulation protein d (sporulation-specific penicillin-binding protein) | SAMN02910353_01343 | Not Available | - | 1549611 - 1552007 | 87626.5 |
| cell division protein ftsl | SAMN02910353_01344 | Not Available | - | 1552371 - 1552877 | 18750.2 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN02910353_01345 | Not Available | - | 1552864 - 1553814 | 34863.5 |
| mraz protein | SAMN02910353_01346 | Not Available | - | 1553884 - 1554312 | 15803.9 |
| spoiid/lytb domain protein | SAMN02910353_01347 | Not Available | - | 1554705 - 1556198 | 54037.2 |
| sortase, srtb family | SAMN02910353_01348 | Not Available | - | 1556270 - 1557208 | 35231.0 |
| sortase b | SAMN02910353_01349 | Not Available | - | 1557205 - 1558773 | 59789.7 |
| thiamine biosynthesis protein thii | SAMN02910353_01350 | Not Available | - | 1559171 - 1560349 | 43431.9 |
| hypothetical protein | SAMN02910353_01351 | Not Available | - | 1560373 - 1560918 | 20670.7 |
| cysteine desulfurase | SAMN02910353_01352 | Not Available | - | 1561039 - 1562166 | 40140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.