Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sporulation-specific sigma factor | SAMN02910353_01333 | Not Available | - | 1537480 - 1538055 | 21392.4 |
| hypothetical protein | SAMN02910353_01334 | Not Available | - | 1538140 - 1539816 | 58995.3 |
| cell division protein ftsz | SAMN02910353_01335 | Not Available | - | 1540023 - 1541153 | 39677.2 |
| cell division protein ftsq | SAMN02910353_01336 | Not Available | - | 1541332 - 1542345 | 38046.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN02910353_01337 | Not Available | - | 1542367 - 1543626 | 44144.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN02910353_01338 | Not Available | - | 1543678 - 1544544 | 32477.8 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN02910353_01339 | Not Available | - | 1544541 - 1545677 | 40591.3 |
| cell division protein ftsw | SAMN02910353_01340 | Not Available | - | 1545690 - 1546976 | 46695.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN02910353_01341 | Not Available | - | 1547005 - 1548051 | 38659.2 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN02910353_01342 | Not Available | - | 1548126 - 1549559 | 52660.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.