Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01312 | Not Available | + | 1502503 - 1503300 | 28746.5 |
| hypothetical protein | SAMN02910353_01313 | Not Available | - | 1503624 - 1504190 | 21641.9 |
| hypothetical protein | SAMN02910353_01314 | Not Available | - | 1504192 - 1504989 | 29117.6 |
| hypothetical protein | SAMN02910353_01315 | Not Available | - | 1505111 - 1512271 | 264509.0 |
| anti-sigma b factor antagonist | SAMN02910353_01316 | Not Available | - | 1512268 - 1512567 | 11228.9 |
| aaa-like domain-containing protein | SAMN02910353_01317 | Not Available | - | 1512569 - 1516882 | 165236.0 |
| hypothetical protein | SAMN02910353_01318 | Not Available | - | 1516925 - 1520920 | 139071.0 |
| hypothetical protein | SAMN02910353_01319 | Not Available | - | 1520924 - 1521865 | 33608.8 |
| type iv secretory system conjugative dna transfer | SAMN02910353_01320 | Not Available | - | 1521902 - 1524697 | 104836.0 |
| hypothetical protein | SAMN02910353_01321 | Not Available | + | 1524901 - 1526214 | 49845.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.