Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01252 | Not Available | + | 1429206 - 1429505 | 11103.8 |
| arac-type dna-binding protein | SAMN02910353_01253 | Not Available | + | 1429629 - 1430492 | 33367.6 |
| muts domain v | SAMN02910353_01254 | Not Available | + | 1430505 - 1432250 | 65157.6 |
| hypothetical protein | SAMN02910353_01255 | Not Available | - | 1432357 - 1432535 | 7006.61 |
| hypothetical protein | SAMN02910353_01256 | Not Available | - | 1432536 - 1432914 | 15246.8 |
| transposase is200 like | SAMN02910353_01257 | Not Available | - | 1433314 - 1433595 | 10954.3 |
| hypothetical protein | SAMN02910353_01258 | Not Available | - | 1433972 - 1434496 | 20304.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN02910353_01259 | Not Available | - | 1434566 - 1435630 | 40782.1 |
| hypothetical protein | SAMN02910353_01260 | Not Available | + | 1435988 - 1437166 | 44680.0 |
| na+-driven multidrug efflux pump | SAMN02910353_01261 | Not Available | + | 1437189 - 1438499 | 49284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.