Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | SAMN02910353_01242 | Not Available | - | 1420291 - 1421373 | 40750.4 |
| hypothetical protein | SAMN02910353_01243 | Not Available | - | 1421395 - 1422063 | 25073.3 |
| asparagine synthase (glutamine-hydrolysing) | SAMN02910353_01244 | Not Available | - | 1422064 - 1423956 | 71771.6 |
| hypothetical protein | SAMN02910353_01245 | Not Available | - | 1424059 - 1424547 | 18696.2 |
| hypothetical protein | SAMN02910353_01246 | Not Available | - | 1424917 - 1425150 | 8837.37 |
| hypothetical protein | SAMN02910353_01247 | Not Available | - | 1425257 - 1425559 | 11437.7 |
| hypothetical protein | SAMN02910353_01248 | Not Available | - | 1425683 - 1426612 | 34343.8 |
| putative gtp pyrophosphokinase | SAMN02910353_01249 | Not Available | - | 1426624 - 1427316 | 26701.3 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN02910353_01250 | Not Available | - | 1427343 - 1428236 | 31949.7 |
| n-glycosylase/dna lyase | SAMN02910353_01251 | Not Available | + | 1428330 - 1429145 | 30805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.