Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine or glycine:cation symporter, agcs family | SAMN02910353_01232 | Not Available | + | 1406880 - 1408106 | 42610.7 |
| hypothetical protein | SAMN02910353_01233 | Not Available | + | 1408156 - 1409274 | 40905.9 |
| ribonuclease j | SAMN02910353_01234 | Not Available | + | 1409566 - 1411440 | 68499.7 |
| c-di-amp phosphodiesterase, consists of a ggdef-like and dhh domains | SAMN02910353_01235 | Not Available | + | 1411499 - 1413475 | 72944.2 |
| large subunit ribosomal protein l9 | SAMN02910353_01236 | Not Available | + | 1413495 - 1413941 | 15815.1 |
| replicative dna helicase | SAMN02910353_01237 | Not Available | + | 1413941 - 1415293 | 50116.0 |
| trna(ile)-lysidine synthase | SAMN02910353_01238 | Not Available | + | 1415295 - 1416671 | 51098.4 |
| cell division protease ftsh | SAMN02910353_01239 | Not Available | + | 1416643 - 1418577 | 71467.0 |
| ph domain-containing protein | SAMN02910353_01240 | Not Available | + | 1418738 - 1419160 | 16682.8 |
| methyltransferase, fkbm family | SAMN02910353_01241 | Not Available | + | 1419178 - 1420242 | 40095.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.