Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hybrid cluster protein-associated redox disulfide domain-containing protein | SAMN02910353_01192 | Not Available | + | 1349039 - 1349242 | 7027.43 |
| lamin tail domain | SAMN02910353_01193 | Not Available | - | 1349369 - 1352020 | 96636.9 |
| hypothetical protein | SAMN02910353_01194 | Not Available | - | 1352241 - 1352600 | 13500.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN02910353_01195 | Not Available | + | 1352619 - 1353638 | 38002.1 |
| hypothetical protein | SAMN02910353_01196 | Not Available | + | 1353641 - 1354822 | 42545.6 |
| leucine rich repeat-containing protein | SAMN02910353_01197 | Not Available | - | 1354857 - 1356533 | 58398.9 |
| flotillin | SAMN02910353_01198 | Not Available | - | 1356747 - 1358273 | 55137.5 |
| stage ii sporulation protein e (spoiie) | SAMN02910353_01199 | Not Available | + | 1358597 - 1360795 | 76869.4 |
| 1,4-alpha-glucan branching enzyme | SAMN02910353_01200 | Not Available | + | 1360992 - 1362965 | 75496.7 |
| glucose-1-phosphate adenylyltransferase | SAMN02910353_01201 | Not Available | + | 1362987 - 1364213 | 45217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.