Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_01172 | Not Available | - | 1329278 - 1330666 | 52293.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_01173 | Not Available | + | 1330950 - 1331513 | 21412.4 |
| hypothetical protein | SAMN02910353_01174 | Not Available | + | 1331526 - 1332881 | 49547.4 |
| hypothetical protein | SAMN02910353_01175 | Not Available | - | 1332938 - 1333165 | 8489.58 |
| heptaprenyl diphosphate synthase | SAMN02910353_01176 | Not Available | - | 1333178 - 1333687 | 18475.5 |
| nusg domain ii | SAMN02910353_01177 | Not Available | - | 1333689 - 1334060 | 13378.2 |
| thiamine biosynthesis lipoprotein | SAMN02910353_01178 | Not Available | - | 1334053 - 1335078 | 36503.8 |
| phosphoglycerate mutase | SAMN02910353_01179 | Not Available | - | 1335154 - 1336674 | 54937.0 |
| triosephosphate isomerase | SAMN02910353_01180 | Not Available | - | 1336744 - 1337520 | 27717.3 |
| hypothetical protein | SAMN02910353_01181 | Not Available | - | 1337546 - 1337782 | 8794.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.