Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilisation nuclease domain-containing protein | SAMN02910353_01122 | Not Available | - | 1272946 - 1273482 | 19878.2 |
| hypothetical protein | SAMN02910353_01123 | Not Available | - | 1273464 - 1273742 | 10717.9 |
| protein of unknown function | SAMN02910353_01124 | Not Available | - | 1273935 - 1274408 | 17490.7 |
| hypothetical protein | SAMN02910353_01125 | Not Available | + | 1275034 - 1275783 | 28922.3 |
| ala-trna(pro) deacylase | SAMN02910353_01126 | Not Available | - | 1275741 - 1276001 | 9957.97 |
| hypothetical protein | SAMN02910353_01127 | Not Available | - | 1276079 - 1277269 | 46108.1 |
| Trna-ser | Not Available | Not Available | + | 1277710 - 1277801 | Not Available |
| Trna-leu | Not Available | Not Available | + | 1277806 - 1277890 | Not Available |
| two-component system, response regulator, stage 0 sporulation protein a | SAMN02910353_01130 | Not Available | + | 1278147 - 1278917 | 28605.7 |
| hypothetical protein | SAMN02910353_01131 | Not Available | + | 1279000 - 1279944 | 35295.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.