Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lectin c-type domain-containing protein | SAMN02910353_00031 | Not Available | + | 40697 - 41839 | 42860.8 |
| hypothetical protein | SAMN02910353_00032 | Not Available | + | 42039 - 43679 | 60651.5 |
| haloacid dehalogenase-like hydrolase | SAMN02910353_00033 | Not Available | + | 43872 - 44705 | 31802.0 |
| putative efflux protein, mate family | SAMN02910353_00034 | Not Available | + | 44750 - 46120 | 49759.2 |
| predicted n-acyltransferase, gnat family | SAMN02910353_00035 | Not Available | + | 46111 - 46560 | 17005.2 |
| multi-copper polyphenol oxidoreductase laccase | SAMN02910353_00036 | Not Available | + | 46557 - 47285 | 26208.5 |
| aspartate aminotransferase | SAMN02910353_00037 | Not Available | + | 47413 - 48489 | 40323.6 |
| predicted metal-binding protein | SAMN02910353_00038 | Not Available | + | 48550 - 49107 | 21235.6 |
| choline kinase | SAMN02910353_00039 | Not Available | + | 49124 - 49843 | 27620.9 |
| choline-phosphate cytidylyltransferase | SAMN02910353_00040 | Not Available | + | 49845 - 51188 | 50060.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.