Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN02910353_01101 | Not Available | - | 1246242 - 1247687 | 53494.2 |
| coth protein | SAMN02910353_01102 | Not Available | + | 1247894 - 1249534 | 60896.5 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN02910353_01103 | Not Available | + | 1249554 - 1250600 | 38307.3 |
| hypothetical protein | SAMN02910353_01104 | Not Available | + | 1250694 - 1251344 | 23992.5 |
| arylformamidase | SAMN02910353_01105 | Not Available | + | 1251414 - 1252001 | 20794.7 |
| macb-like core domain-containing protein | SAMN02910353_01106 | Not Available | - | 1252127 - 1253401 | 47679.7 |
| putative abc transport system atp-binding protein | SAMN02910353_01107 | Not Available | - | 1253401 - 1254102 | 25998.7 |
| hypothetical protein | SAMN02910353_01108 | Not Available | - | 1254141 - 1254371 | 8612.46 |
| hypothetical protein | SAMN02910353_01109 | Not Available | - | 1254470 - 1255060 | 23588.8 |
| metallopeptidase family m24 | SAMN02910353_01110 | Not Available | - | 1255175 - 1255864 | 26253.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.