Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | + | 1235860 - 1235936 | Not Available |
| Trna-gly | Not Available | Not Available | + | 1235939 - 1236014 | Not Available |
| Trna-cys | Not Available | Not Available | + | 1236017 - 1236091 | Not Available |
| endo-1,4-beta-xylanase | SAMN02910353_01094 | Not Available | - | 1236247 - 1239117 | 104297.0 |
| serine o-acetyltransferase | SAMN02910353_01095 | Not Available | + | 1239524 - 1240483 | 35723.8 |
| putative abc transport system permease protein | SAMN02910353_01096 | Not Available | - | 1240520 - 1241830 | 47573.4 |
| putative abc transport system atp-binding protein | SAMN02910353_01097 | Not Available | - | 1241827 - 1242573 | 27684.4 |
| hlyd family secretion protein | SAMN02910353_01098 | Not Available | - | 1242575 - 1243999 | 51279.2 |
| uncharacterized conserved protein, duf1015 family | SAMN02910353_01099 | Not Available | - | 1244269 - 1245531 | 46554.4 |
| septum formation protein | SAMN02910353_01100 | Not Available | - | 1245536 - 1246105 | 20346.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.