Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tocopherol cyclase | SAMN02910353_01071 | Not Available | + | 1209782 - 1210918 | 43246.2 |
| v/a-type h+-transporting atpase subunit d | SAMN02910353_01072 | Not Available | - | 1211233 - 1211883 | 24846.4 |
| v/a-type h+-transporting atpase subunit b | SAMN02910353_01073 | Not Available | - | 1211895 - 1213271 | 51022.2 |
| v/a-type h+-transporting atpase subunit a | SAMN02910353_01074 | Not Available | - | 1213271 - 1215040 | 64760.6 |
| v/a-type h+-transporting atpase subunit f | SAMN02910353_01075 | Not Available | - | 1215057 - 1215380 | 11209.4 |
| v/a-type h+-transporting atpase subunit c | SAMN02910353_01076 | Not Available | - | 1215373 - 1216317 | 34904.6 |
| v/a-type h+-transporting atpase subunit e | SAMN02910353_01077 | Not Available | - | 1216317 - 1216916 | 21813.9 |
| v/a-type h+-transporting atpase subunit k | SAMN02910353_01078 | Not Available | - | 1216934 - 1217407 | 15664.9 |
| v/a-type h+-transporting atpase subunit i | SAMN02910353_01079 | Not Available | - | 1217400 - 1219373 | 73004.9 |
| vacuolar (h+)-atpase g subunit | SAMN02910353_01080 | Not Available | - | 1219410 - 1219721 | 11329.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.