Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN02910353_01031 | Not Available | + | 1158792 - 1161137 | 87139.6 |
| Trna-gly | Not Available | Not Available | + | 1161343 - 1161417 | Not Available |
| hypothetical protein | SAMN02910353_01033 | Not Available | + | 1161651 - 1162169 | 19341.5 |
| Trna-leu | Not Available | Not Available | + | 1162369 - 1162453 | Not Available |
| hypothetical protein | SAMN02910353_01035 | Not Available | + | 1163095 - 1163316 | 8017.9 |
| hypothetical protein | SAMN02910353_01036 | Not Available | + | 1163473 - 1163757 | 10590.4 |
| glutamine amidotransferase | SAMN02910353_01037 | Not Available | + | 1163773 - 1164012 | 9178.33 |
| hypothetical protein | SAMN02910353_01038 | Not Available | + | 1164041 - 1164250 | 8052.34 |
| asparagine synthase (glutamine-hydrolysing) | SAMN02910353_01039 | Not Available | - | 1164389 - 1165966 | 59442.6 |
| acetyltransferase (gnat) family protein | SAMN02910353_01040 | Not Available | - | 1166040 - 1166504 | 17665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.