Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain (group 2) | SAMN02910353_00021 | Not Available | - | 27576 - 28595 | 37219.0 |
| enterochelin esterase | SAMN02910353_00022 | Not Available | - | 28856 - 30472 | 58623.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_00023 | Not Available | + | 31092 - 31643 | 21424.6 |
| hypothetical protein | SAMN02910353_00024 | Not Available | + | 31630 - 32826 | 42592.0 |
| hypothetical protein | SAMN02910353_00025 | Not Available | + | 32840 - 33646 | 29154.0 |
| signal transduction histidine kinase | SAMN02910353_00026 | Not Available | - | 33723 - 35030 | 48647.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910353_00027 | Not Available | - | 35027 - 35779 | 27803.4 |
| hypothetical protein | SAMN02910353_00028 | Not Available | - | 35742 - 37127 | 50686.1 |
| putative abc transport system atp-binding protein | SAMN02910353_00029 | Not Available | - | 37143 - 37901 | 27971.9 |
| ftsx-like permease family protein | SAMN02910353_00030 | Not Available | - | 37915 - 40278 | 89054.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.