Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yabp family protein | SAMN02910353_00991 | Not Available | - | 1114829 - 1115119 | 10955.1 |
| hypothetical protein | SAMN02910353_00992 | Not Available | + | 1115140 - 1116249 | 38341.2 |
| trna(adenine34) deaminase | SAMN02910353_00993 | Not Available | - | 1116357 - 1116824 | 17106.8 |
| caax protease self-immunity | SAMN02910353_00994 | Not Available | - | 1116821 - 1117978 | 43211.7 |
| dna-binding transcriptional regulator, arsr family | SAMN02910353_00995 | Not Available | - | 1118097 - 1118435 | 12616.3 |
| hypothetical protein | SAMN02910353_00996 | Not Available | - | 1118447 - 1118893 | 17220.9 |
| cellobiose phosphorylase | SAMN02910353_00997 | Not Available | + | 1119285 - 1121699 | 90014.4 |
| glucuronoarabinoxylan endo-1,4-beta-xylanase | SAMN02910353_00998 | Not Available | - | 1121837 - 1124893 | 110355.0 |
| dna-binding transcriptional regulator, laci/purr family | SAMN02910353_00999 | Not Available | + | 1125258 - 1127438 | 83713.6 |
| hypothetical protein | SAMN02910353_01000 | Not Available | - | 1128275 - 1128991 | 27581.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.