Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00981 | Not Available | - | 1102897 - 1103904 | 36282.3 |
| rna polymerase sigma factor | SAMN02910353_00982 | Not Available | - | 1103901 - 1104623 | 27659.0 |
| hypothetical protein | SAMN02910353_00983 | Not Available | - | 1104733 - 1105500 | 28221.5 |
| hypothetical protein | SAMN02910353_00984 | Not Available | - | 1105511 - 1106203 | 25474.6 |
| n6-l-threonylcarbamoyladenine synthase | SAMN02910353_00985 | Not Available | - | 1106217 - 1107227 | 35445.4 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN02910353_00986 | Not Available | - | 1107227 - 1107688 | 16721.8 |
| dna polymerase i | SAMN02910353_00987 | Not Available | - | 1107693 - 1110227 | 92965.1 |
| uncharacterized membrane protein | SAMN02910353_00988 | Not Available | - | 1110430 - 1111314 | 31674.9 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN02910353_00989 | Not Available | + | 1111577 - 1113640 | 74294.0 |
| similar to stage iv sporulation protein | SAMN02910353_00990 | Not Available | - | 1113694 - 1114857 | 44087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.