Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | SAMN02910353_00961 | Not Available | - | 1082633 - 1084750 | 77248.6 |
| hypothetical protein | SAMN02910353_00962 | Not Available | - | 1084805 - 1085362 | 21320.7 |
| rod shape-determining protein mrec | SAMN02910353_00963 | Not Available | - | 1085340 - 1086215 | 31764.1 |
| rod shape-determining protein mreb | SAMN02910353_00964 | Not Available | - | 1086227 - 1087243 | 36059.8 |
| protein of unknown function | SAMN02910353_00965 | Not Available | - | 1087393 - 1087662 | 9472.88 |
| dutp pyrophosphatase | SAMN02910353_00966 | Not Available | - | 1087704 - 1088141 | 15501.6 |
| putative protease | SAMN02910353_00967 | Not Available | - | 1088141 - 1090177 | 73626.9 |
| cell division protein zapa | SAMN02910353_00968 | Not Available | - | 1090174 - 1090539 | 13591.5 |
| hypothetical protein | SAMN02910353_00969 | Not Available | - | 1090582 - 1092078 | 54764.6 |
| repressor lexa | SAMN02910353_00970 | Not Available | - | 1092098 - 1092679 | 21311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.