Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerate dehydrogenase | SAMN02910353_00951 | Not Available | + | 1070295 - 1071245 | 34242.9 |
| glutamate 5-kinase | SAMN02910353_00952 | Not Available | + | 1071258 - 1072061 | 28581.7 |
| glutamate-5-semialdehyde dehydrogenase | SAMN02910353_00953 | Not Available | + | 1072072 - 1073319 | 43966.7 |
| hypothetical protein | SAMN02910353_00954 | Not Available | + | 1073375 - 1073856 | 17800.9 |
| hypothetical protein | SAMN02910353_00955 | Not Available | + | 1074097 - 1075419 | 48378.4 |
| Trna-leu | Not Available | Not Available | + | 1075574 - 1075658 | Not Available |
| predicted n-acetyltransferase yhbs | SAMN02910353_00957 | Not Available | + | 1076002 - 1076655 | 24603.3 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN02910353_00958 | Not Available | + | 1076972 - 1079206 | 82661.9 |
| putative hemolysin | SAMN02910353_00959 | Not Available | - | 1079542 - 1080867 | 48695.6 |
| gdsl-like lipase/acylhydrolase family protein | SAMN02910353_00960 | Not Available | + | 1081256 - 1082590 | 47240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.