Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00931 | Not Available | + | 1045453 - 1046022 | 21850.0 |
| hypothetical protein | SAMN02910353_00932 | Not Available | - | 1046167 - 1046544 | 13193.5 |
| triacylglycerol esterase/lipase esta, alpha/beta hydrolase fold | SAMN02910353_00933 | Not Available | + | 1046760 - 1047692 | 35027.8 |
| putative iron-only hydrogenase system regulator | SAMN02910353_00934 | Not Available | + | 1047791 - 1048039 | 8757.67 |
| hypothetical protein | SAMN02910353_00935 | Not Available | + | 1048048 - 1048515 | 17274.6 |
| 2-iminoacetate synthase | SAMN02910353_00936 | Not Available | + | 1048533 - 1049981 | 54872.4 |
| rna polymerase sporulation-specific sigma factor | SAMN02910353_00937 | Not Available | - | 1050063 - 1050836 | 29239.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00938 | Not Available | + | 1051054 - 1052997 | 73733.8 |
| hypothetical protein | SAMN02910353_00939 | Not Available | + | 1052975 - 1053832 | 31562.5 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN02910353_00940 | Not Available | - | 1053961 - 1055082 | 41658.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.