Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_00921 | Not Available | + | 1033931 - 1034143 | 8069.5 |
| res domain-containing protein | SAMN02910353_00922 | Not Available | - | 1034189 - 1035472 | 49632.1 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN02910353_00923 | Not Available | - | 1035506 - 1035817 | 11833.2 |
| protein of unknown function | SAMN02910353_00924 | Not Available | + | 1035992 - 1036465 | 18276.9 |
| dynamin family protein | SAMN02910353_00925 | Not Available | + | 1036645 - 1039020 | 90694.4 |
| aaa-like domain-containing protein | SAMN02910353_00926 | Not Available | + | 1039047 - 1042652 | 132407.0 |
| dna/rna non-specific endonuclease | SAMN02910353_00927 | Not Available | + | 1042652 - 1043359 | 26382.1 |
| protein of unknown function, duf600 | SAMN02910353_00928 | Not Available | + | 1043356 - 1043733 | 14861.5 |
| putative dna-binding domain-containing protein | SAMN02910353_00929 | Not Available | + | 1043770 - 1044108 | 12407.1 |
| transposase and inactivated derivatives, is30 family | SAMN02910353_00930 | Not Available | + | 1044215 - 1045267 | 40550.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.