Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN02910353_00911 | Not Available | + | 1025568 - 1026521 | 36802.2 |
| histidinol-phosphatase (php family) | SAMN02910353_00912 | Not Available | + | 1026832 - 1027620 | 29648.8 |
| gmp synthase (glutamine-hydrolysing) | SAMN02910353_00913 | Not Available | + | 1027785 - 1029335 | 57236.6 |
| helix-turn-helix domain-containing protein | SAMN02910353_00914 | Not Available | - | 1029374 - 1029589 | 8487.14 |
| host cell surface-exposed lipoprotein | SAMN02910353_00915 | Not Available | + | 1029740 - 1030348 | 21715.1 |
| site-specific dna recombinase | SAMN02910353_00916 | Not Available | - | 1030429 - 1032060 | 62078.8 |
| transposon-encoded protein tnpw | SAMN02910353_00917 | Not Available | - | 1032150 - 1032368 | 8131.6 |
| hypothetical protein | SAMN02910353_00918 | Not Available | - | 1032361 - 1032507 | 5570.81 |
| hypothetical protein | SAMN02910353_00919 | Not Available | - | 1032514 - 1032867 | 13190.6 |
| mobilisation protein (mobc) | SAMN02910353_00920 | Not Available | + | 1033395 - 1033739 | 13213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.