Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 14992 - 15228 | 18.01 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_00012 | Not Available | - | 13790 - 15229 | 54116.6 |
| hypothetical protein | SAMN02910353_00013 | Not Available | + | 15491 - 15808 | 12445.1 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN02910353_00014 | Not Available | - | 15987 - 16442 | 17018.3 |
| cellulose binding domain-containing protein | SAMN02910353_00015 | Not Available | + | 16596 - 18965 | 88716.7 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_00016 | Not Available | + | 19150 - 21492 | 87074.9 |
| transferase hexapeptide (six repeat-containing protein) | SAMN02910353_00017 | Not Available | + | 21887 - 22552 | 23711.4 |
| udp-n-acetylglucosamine/udp-n- acetylgalactosaminediphosphorylase | SAMN02910353_00018 | Not Available | + | 22578 - 23810 | 45648.6 |
| atp-binding cassette, subfamily b | SAMN02910353_00019 | Not Available | + | 23922 - 25649 | 63047.1 |
| atp-binding cassette, subfamily b | SAMN02910353_00020 | Not Available | + | 25642 - 27381 | 63589.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.