Bacteroides fragilis

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis is a Gram-negative, rod-shaped bacterium that thrives as an obligate anaerobe, functioning primarily as a chemoheterotroph, utilizing organic compounds for energy production. This microbe is predominantly found in the human gastrointestinal tract, where it plays a crucial role in maintaining gut health and homeostasis.As an obligate anaerobe, B. fragilis cannot survive in the presence of oxygen, which is essential for its metabolic processes. It metabolizes nutrients through fermentation pathways, breaking down complex carbohydrates and proteins to produce short-chain fatty acids, which are beneficial for colon health and serve as energy sources for intestinal cells. This ability to thrive in an oxygen-free environment contributes to the microbe's prevalence in the human gut, where it can constitute a significant portion of the gut microbiota. Bacteroides fragilis has a unique shape characterized by its rod-like structure, which aids in its adaptability and survival within the intestines. This bacterium is not only found in humans but can also be present in various other mammals, highlighting its role in the broader ecosystem of gut microbiomes across species. Moreover, B. fragilis is notable for its potential to influence human health positively and negatively. While it contributes to the digestion of complex polysaccharides and supports the immune system, it can also lead to opportunistic infections if it enters sterile areas of the body, such as during abdominal surgery or in cases of perforated bowel. Its dual nature underscores the delicate balance of microbial communities within the body and the potential implications for health and disease. The study of Bacteroides fragilis continues to reveal insights into the complex relationships between gut microbiota and host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis


Gene Summary

Adenine Count

1509830 bp

Thymine Count

1489963 bp

Guanine Count

1128886 bp

Cytosine Count

1163404 bp

Genome Length

5292183 bp

Protein-coding Genes

4501 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rna polymerase sigma-70 factorDWW08_13670Not Available+3176940 - 317751522885.0
serine/threonine protein phosphataseDWW08_13680Not Available-3177719 - 317879240817.5
endonuclease/exonuclease/phosphatase family proteinDWW08_13685Not Available-3178876 - 317990439013.7
susd/ragb family nutrient-binding outer membrane lipoproteinDWW08_13690Not Available-3179993 - 318151357349.9
susc/raga family tonb-linked outer membrane proteinDWW08_13695Not Available-3181527 - 3184832123423.0
hypothetical proteinDWW08_13700Not Available-3184777 - 31849868228.14
duf4974 domain-containing proteinDWW08_13705Not Available-3185084 - 318610639445.1
rna polymerase sigma-70 factorDWW08_13710Not Available+3186211 - 318679222969.4
sensor histidine kinaseDWW08_13715Not Available-3186816 - 318871172024.7
valine--trna ligaseDWW08_13720Not Available-3188828 - 319145899819.4

Displaying genes 7211 – 7220 of 9069 in total

Pathways

23 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites