Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas cassavae |
| Strain | VdM 147, ZD1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Manihot esculenta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xanthomonas cassavae VdM 147, ZD1
Gene Summary
Adenine Count
11471 bp
Thymine Count
11221 bp
Guanine Count
18230 bp
Cytosine Count
17930 bp
Genome Length
59452 bp
Protein-coding Genes
71 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Helix-turn-helix xre-family dna binding protein | - | Not Available | Negative | 2602628 - 2603017 | 13617.6 |
| Hypothetical protein | - | Not Available | Positive | 2603248 - 2603520 | 9656.53 |
| hypothetical protein | - | Not Available | Positive | 2603517 - 2603690 | 6365.86 |
| hypothetical protein | - | Not Available | Positive | 2603683 - 2603859 | 6317.41 |
| Attl | Not Available | Not Available | Positive | 2603798 - 2603812 | Not Available |
| Probable site-specific integrase | - | Q38617 | Positive | 2603951 - 2604892 | 35675.6 |
| Ssdna-binding protein | - | P68676 | Positive | 2604889 - 2605185 | 10873.0 |
| Hypothetical protein | - | P68671 | Positive | 2605189 - 2605440 | 8630.42 |
| hypothetical protein | - | Not Available | Positive | 2605469 - 2605597 | 4085.07 |
| hypothetical protein | - | Not Available | Positive | 2606195 - 2606491 | 9949.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.