Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | ISP_009343 | P42434 | + | 10336190 - 10338334 | 76433.4 |
| glycoside hydrolase family 5 protein | ISP_009344 | Not Available | + | 10338493 - 10339479 | 35412.1 |
| duf2784 domain-containing protein | ISP_009345 | Not Available | - | 10339491 - 10339886 | 14521.8 |
| hypothetical protein | ISP_009346 | Not Available | - | 10340200 - 10340532 | 11468.9 |
| asp23/gls24 family envelope stress response protein | ISP_009347 | Not Available | - | 10340529 - 10340900 | 12953.5 |
| asp23/gls24 family envelope stress response protein | ISP_009348 | Not Available | - | 10340897 - 10341481 | 20546.5 |
| rna polymerase sigma factor | ISP_009349 | Q06198 | - | 10341472 - 10342023 | 20466.6 |
| orotate phosphoribosyltransferase | ISP_009350 | P0A5U1 | - | 10342129 - 10342692 | 19828.8 |
| abc transporter permease | ISP_009351 | Not Available | - | 10342720 - 10345167 | 83424.9 |
| abc transporter atp-binding protein | ISP_009352 | Q58206 | - | 10345167 - 10345928 | 27014.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.