Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | ISP_009263 | O34677 | - | 10259054 - 10259767 | 25655.1 |
| amino acid abc transporter permease | ISP_009264 | P54536 | - | 10259794 - 10260558 | 27499.2 |
| abc transporter substrate-binding protein | ISP_009265 | P54535 | - | 10260565 - 10261344 | 27063.8 |
| abc transporter substrate-binding protein | ISP_009266 | P54952 | - | 10261437 - 10262219 | 27395.6 |
| transporter substrate-binding domain-containing protein | ISP_009267 | Q46125 | - | 10262221 - 10263039 | 28338.5 |
| adenylosuccinate lyase | ISP_009268 | A3KN12 | - | 10263191 - 10264618 | 52352.9 |
| galactonate dehydratase | ISP_009269 | Q8XVS8 | - | 10264665 - 10265810 | 41288.2 |
| sdr family oxidoreductase | ISP_009270 | Q51576 | - | 10265826 - 10266503 | 23229.7 |
| lactonase family protein | ISP_009271 | O34499 | + | 10266698 - 10267702 | 34127.1 |
| fadr family transcriptional regulator | ISP_009272 | P31460 | + | 10267754 - 10268458 | 25619.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.