Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | ISP_009233 | P45388 | - | 10228450 - 10228866 | 14972.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | ISP_009234 | Q2RGU7 | - | 10228915 - 10229985 | 37264.9 |
| amidophosphoribosyltransferase | ISP_009235 | P65830 | - | 10230016 - 10231542 | 54055.4 |
| hypothetical protein | ISP_009236 | Not Available | - | 10231661 - 10231966 | 11188.2 |
| duf397 domain-containing protein | ISP_009237 | Not Available | - | 10231953 - 10232192 | 8445.88 |
| helix-turn-helix domain-containing protein | ISP_009238 | Not Available | - | 10232447 - 10233325 | 33641.6 |
| sam-dependent methyltransferase | ISP_009239 | Not Available | + | 10233526 - 10234323 | 29764.3 |
| sterol carrier family protein | ISP_009240 | Not Available | - | 10234337 - 10234717 | 13360.0 |
| type vii secretion system-associated protein | ISP_009241 | Not Available | + | 10234774 - 10235478 | 25834.7 |
| lysozyme | ISP_009242 | P00721 | + | 10235583 - 10236383 | 28417.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.