Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | ISP_000642 | Q1AWA3 | + | 668726 - 669517 | 27464.1 |
| 3-amino-5-hydroxybenzoate synthase | ISP_000643 | O52552 | + | 669657 - 670823 | 42213.0 |
| gfo/idh/moca family oxidoreductase | ISP_000644 | Q7BUE1 | + | 671219 - 672295 | 37935.1 |
| had-ia family hydrolase | ISP_000645 | P40852 | + | 672310 - 673008 | 24855.9 |
| rok family protein | ISP_000646 | G0FS68 | + | 673013 - 673924 | 30825.0 |
| pig-l family deacetylase | ISP_000647 | Q47SP3 | + | 673991 - 674758 | 27459.1 |
| alpha/beta hydrolase | ISP_000648 | P9WK86 | + | 674835 - 675767 | 33520.1 |
| mfs transporter | ISP_000649 | P34698 | + | 676064 - 677572 | 50899.4 |
| tetr/acrr family transcriptional regulator | ISP_000650 | P9WMD2 | + | 677658 - 678386 | 27051.0 |
| pyridoxamine 5'-phosphate oxidase family protein | ISP_000651 | Not Available | - | 678393 - 678881 | 18304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.