Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | ISP_009183 | P0ACN2 | - | 10112360 - 10112713 | 12770.6 |
| tigr03618 family f420-dependent ppox class oxidoreductase | ISP_009184 | O06553 | + | 10112763 - 10113194 | 15949.0 |
| is3 family transposase | ISP_009185 | P0CF79 | - | 10113476 - 10114357 | 33091.7 |
| transposase | ISP_009186 | P59801 | - | 10114354 - 10114644 | 11061.1 |
| is30 family transposase | ISP_009187 | Not Available | - | 10185214 - 10186536 | 45871.4 |
| gfo/idh/moca family oxidoreductase | ISP_009188 | Q9TV69 | - | 10186582 - 10187547 | 34181.0 |
| hypothetical protein | ISP_009189 | Not Available | + | 10187605 - 10188144 | 18148.0 |
| trna dihydrouridine synthase dusb | ISP_009190 | P9WNS6 | + | 10188194 - 10189333 | 40822.9 |
| is30 family transposase | ISP_009191 | B3PGJ1 | + | 10189828 - 10190610 | 28033.2 |
| ricin-type beta-trefoil lectin domain protein | ISP_009192 | P26514 | + | 10190650 - 10191351 | 23790.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.