Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sgcj/ecac family oxidoreductase | ISP_009163 | Not Available | - | 10092173 - 10092604 | 16053.0 |
| ycii family protein | ISP_009164 | Q52996 | + | 10092686 - 10093042 | 13069.6 |
| rna polymerase sigma factor | ISP_009165 | Q52997 | + | 10093039 - 10094235 | 42968.4 |
| atp-binding cassette domain-containing protein | ISP_009166 | C0SP98 | - | 10094283 - 10095395 | 40493.5 |
| abc transporter atp-binding protein | ISP_009167 | P04285 | - | 10095392 - 10096387 | 36075.1 |
| abc transporter permease | ISP_009168 | P94312 | - | 10096395 - 10097324 | 32806.1 |
| abc transporter permease | ISP_009169 | P94311 | - | 10097321 - 10098322 | 35914.0 |
| abc transporter substrate-binding protein | ISP_009170 | P23847 | - | 10098409 - 10100088 | 60958.7 |
| uridine kinase | ISP_009171 | Not Available | - | 10100418 - 10100921 | 17514.0 |
| duf2304 domain-containing protein | ISP_009172 | Not Available | - | 10100959 - 10101393 | 15792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.