Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | ISP_000892 | Q91YP3 | - | 927774 - 928748 | 34560.4 |
| duf1707 domain-containing protein | ISP_000893 | P9WKM0 | - | 928833 - 929447 | 21448.7 |
| protein tyrosine phosphatase | ISP_000894 | Q57668 | + | 929533 - 929955 | 15568.5 |
| uracil phosphoribosyltransferase | ISP_000895 | B1MFZ1 | + | 929961 - 930584 | 22258.0 |
| pentapeptide repeat-containing protein | ISP_000896 | Not Available | + | 930619 - 931530 | 33640.0 |
| rna polymerase sigma factor | ISP_000897 | H8EXN1 | + | 931566 - 932150 | 21644.5 |
| hypothetical protein | ISP_000898 | Not Available | + | 932147 - 933424 | 44575.3 |
| tetr/acrr family transcriptional regulator | ISP_000899 | P9WMC8 | - | 933397 - 934014 | 21920.2 |
| merr family transcriptional regulator | ISP_000900 | P44558 | + | 934098 - 934499 | 15108.2 |
| aldo/keto reductase | ISP_000901 | A2XRZ0 | + | 934550 - 935473 | 32909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.