Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_009063 | Not Available | - | 9991704 - 9992354 | 22501.3 |
| hypothetical protein | ISP_009064 | Not Available | - | 9992406 - 9992996 | 20140.8 |
| sodium-translocating pyrophosphatase | ISP_009065 | Q9X913 | - | 9993153 - 9995447 | 77646.1 |
| dead/deah box helicase | ISP_009066 | P50830 | + | 9995798 - 9998362 | 89256.2 |
| bifunctional dna primase/polymerase | ISP_009067 | Not Available | - | 9998455 - 9999072 | 22659.9 |
| flp pilus-assembly tade/g-like family protein | ISP_009068 | O69622 | - | 10000049 - 10000405 | 12038.4 |
| pilus assembly protein | ISP_009069 | O69623 | - | 10000473 - 10000808 | 11079.3 |
| duf4244 domain-containing protein | ISP_009070 | Not Available | - | 10000829 - 10001005 | 6291.63 |
| type ii secretion system f family protein | ISP_009071 | Not Available | - | 10001036 - 10001752 | 23908.3 |
| type ii secretion system protein | ISP_009072 | Not Available | - | 10001749 - 10002507 | 26086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.