Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr03086 family metal-binding protein | ISP_008993 | P9WKS2 | - | 9918998 - 9919579 | 19936.6 |
| helix-turn-helix domain-containing protein | ISP_008994 | P43458 | + | 9919615 - 9920472 | 31458.2 |
| lsr2 family protein | ISP_008995 | P65649 | - | 9920614 - 9920964 | 12740.8 |
| lysine--trna ligase | ISP_008996 | A6W5H6 | - | 9921110 - 9922621 | 56240.0 |
| class i sam-dependent methyltransferase | ISP_008997 | P9WK00 | + | 9922699 - 9923454 | 27545.5 |
| type iii pantothenate kinase | ISP_008998 | A4F6T2 | - | 9923759 - 9924535 | 27303.3 |
| aspartate 1-decarboxylase | ISP_008999 | A4F6T1 | - | 9924541 - 9925038 | 17692.9 |
| pantoate--beta-alanine ligase | ISP_009000 | A4F6T0 | - | 9925048 - 9925959 | 32567.1 |
| duf2520 domain-containing protein | ISP_009001 | Not Available | - | 9925956 - 9926861 | 30880.2 |
| prsw family intramembrane metalloprotease | ISP_009002 | Q5KXR9 | - | 9927106 - 9928209 | 39168.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.