Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ISP_008943 | A4F6W3 | + | 9867423 - 9868037 | 21122.5 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ISP_008944 | C0ZPR8 | + | 9868034 - 9868501 | 15512.3 |
| ppox class f420-dependent oxidoreductase | ISP_008945 | O06553 | + | 9868530 - 9868925 | 14453.2 |
| ppox class f420-dependent oxidoreductase | ISP_008946 | O06553 | + | 9868936 - 9869322 | 14023.4 |
| had family hydrolase | ISP_008947 | Q9CYW4 | + | 9869345 - 9870031 | 25328.1 |
| cysteine--trna ligase | ISP_008948 | A4F6W7 | + | 9870075 - 9871463 | 50915.7 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | ISP_008949 | Q1B2P4 | + | 9871493 - 9872449 | 33394.2 |
| mboat family protein | ISP_008950 | O52196 | + | 9872502 - 9873935 | 53259.9 |
| histidine phosphatase family protein | ISP_008951 | Q61CA3 | + | 9874134 - 9874739 | 22401.7 |
| transglutaminase family protein | ISP_008952 | Not Available | + | 9874813 - 9875394 | 21018.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.