Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4232 domain-containing protein | ISP_008913 | Not Available | - | 9830318 - 9830929 | 20143.6 |
| chat domain-containing protein | ISP_008914 | Not Available | - | 9831058 - 9833604 | 89842.1 |
| hypothetical protein | ISP_008915 | Not Available | - | 9833689 - 9834174 | 17531.9 |
| sigma-70 family rna polymerase sigma factor | ISP_008916 | P66812 | - | 9834171 - 9834740 | 21272.6 |
| s8 family serine peptidase | ISP_008917 | P58502 | - | 9834743 - 9836368 | 56812.1 |
| hypothetical protein | ISP_008918 | Not Available | + | 9836567 - 9839707 | 113415.0 |
| rna polymerase sigma factor sigj | ISP_008919 | L0TCG5 | - | 9839676 - 9840557 | 31393.6 |
| carboxymuconolactone decarboxylase family protein | ISP_008920 | P20370 | + | 9840719 - 9841114 | 13937.8 |
| alpha-l-fucosidase | ISP_008921 | Q2KIM0 | + | 9841222 - 9844032 | 101046.0 |
| hypothetical protein | ISP_008922 | Not Available | - | 9844021 - 9844644 | 22391.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.